Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALS77278.1 | ALS77279.1 | AUO94_00855 | AUO94_00860 | Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.481 |
ALS77278.1 | ALS80203.2 | AUO94_00855 | AUO94_00850 | Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.935 |
ALS77279.1 | ALS77278.1 | AUO94_00860 | AUO94_00855 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.481 |
ALS77279.1 | ALS77423.1 | AUO94_00860 | AUO94_01640 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.916 |
ALS77279.1 | ALS77524.1 | AUO94_00860 | AUO94_02195 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.433 |
ALS77279.1 | ALS77896.1 | AUO94_00860 | AUO94_04210 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | N-acetylglucosaminyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.723 |
ALS77279.1 | ALS78482.1 | AUO94_00860 | AUO94_07325 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Poly-beta-1,6 N-acetyl-D-glucosamine synthase; Predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.945 |
ALS77279.1 | ALS80203.2 | AUO94_00860 | AUO94_00850 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.461 |
ALS77423.1 | ALS77279.1 | AUO94_01640 | AUO94_00860 | Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.916 |
ALS77524.1 | ALS77279.1 | AUO94_02195 | AUO94_00860 | Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.433 |
ALS77524.1 | ALS77896.1 | AUO94_02195 | AUO94_04210 | Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology. | N-acetylglucosaminyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.453 |
ALS77896.1 | ALS77279.1 | AUO94_04210 | AUO94_00860 | N-acetylglucosaminyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.723 |
ALS77896.1 | ALS77524.1 | AUO94_04210 | AUO94_02195 | N-acetylglucosaminyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.453 |
ALS78482.1 | ALS77279.1 | AUO94_07325 | AUO94_00860 | Poly-beta-1,6 N-acetyl-D-glucosamine synthase; Predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.945 |
ALS80203.2 | ALS77278.1 | AUO94_00850 | AUO94_00855 | RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology. | Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.935 |
ALS80203.2 | ALS77279.1 | AUO94_00850 | AUO94_00860 | RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.461 |