STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALS77280.1Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (510 aa)    
Predicted Functional Partners:
ALS77281.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.959
ALS80275.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.800
ALS80242.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.798
ALS78486.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.761
ALS77878.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.753
ALS78491.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.475
ALS77286.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.464
ALS78479.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.461
ALS78078.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.426
Your Current Organism:
Planococcus kocurii
NCBI taxonomy Id: 1374
Other names: AJ 3345, ATCC 43650, DSM 20747, IAM 12847, IFO 15850, JCM 2569, LMG 17320, LMG:17320, NBRC 15850, NCIMB 629, P. kocurii, strain HK 701
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