STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALS78790.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (682 aa)    
Predicted Functional Partners:
ALS77421.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
0.884
ALS79802.1
Transcriptional regulator; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.881
ALS77431.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.854
ALS79803.1
Ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.799
ALS77425.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.759
ALS77788.1
Phytochrome cph2 (bacteriophytochrome cph2); Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.751
ALS79561.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
0.751
ALS80053.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.720
ALS77974.1
Response regulator receiver protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.684
ALS77422.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.673
Your Current Organism:
Planococcus kocurii
NCBI taxonomy Id: 1374
Other names: AJ 3345, ATCC 43650, DSM 20747, IAM 12847, IFO 15850, JCM 2569, LMG 17320, LMG:17320, NBRC 15850, NCIMB 629, P. kocurii, strain HK 701
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