STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALS79117.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (833 aa)    
Predicted Functional Partners:
ALS79119.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.815
ALS79118.1
tRNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.809
ALS77178.1
Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.768
ALS77176.1
Nucleoid occlusion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.756
ALS78203.1
Division initiation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.733
ALS79060.1
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.699
ALS77177.1
Sporulation initiation inhibitor Soj; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.656
ALS79116.1
UDP-N-acetylmuramate--alanine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.637
ALS78200.1
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.636
ALS79120.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.610
Your Current Organism:
Planococcus kocurii
NCBI taxonomy Id: 1374
Other names: AJ 3345, ATCC 43650, DSM 20747, IAM 12847, IFO 15850, JCM 2569, LMG 17320, LMG:17320, NBRC 15850, NCIMB 629, P. kocurii, strain HK 701
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.