STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALS79238.15'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)    
Predicted Functional Partners:
ALS77167.1
DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.966
ALS78314.1
DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.901
ALS78311.1
DNA recombination/repair protein RecA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.899
ALS78315.1
DNA mismatch repair protein MutL; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.881
ALS79032.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.825
ALS77498.1
Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.806
ALS77511.1
ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.760
ALS78363.1
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.760
ALS79305.1
DNA repair exonuclease YhaO; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.756
ALS79878.1
Exonuclease sbcCD subunit D; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.756
Your Current Organism:
Planococcus kocurii
NCBI taxonomy Id: 1374
Other names: AJ 3345, ATCC 43650, DSM 20747, IAM 12847, IFO 15850, JCM 2569, LMG 17320, LMG:17320, NBRC 15850, NCIMB 629, P. kocurii, strain HK 701
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.