STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALS80345.1ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1256 aa)    
Predicted Functional Partners:
ALS79532.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.809
ALS78621.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.781
ALS78623.1
ATP-dependent Lon protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.758
ALS77540.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.704
ALS78233.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.679
ALS79437.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.678
ALS78131.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.665
ALS77810.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.659
ALS77182.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.650
ALS79744.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.642
Your Current Organism:
Planococcus kocurii
NCBI taxonomy Id: 1374
Other names: AJ 3345, ATCC 43650, DSM 20747, IAM 12847, IFO 15850, JCM 2569, LMG 17320, LMG:17320, NBRC 15850, NCIMB 629, P. kocurii, strain HK 701
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