STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJE45998.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (693 aa)    
Predicted Functional Partners:
KJE45996.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.909
KJE45999.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.806
KJE45997.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
    
  0.793
KJE48051.1
Outer membrane channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.709
KJE44355.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.709
KJE46596.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.700
KJE46133.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.698
KJE48281.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.676
KJE46598.1
Channel protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.676
KJE46131.1
Channel protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.676
Your Current Organism:
Thalassomonas viridans
NCBI taxonomy Id: 137584
Other names: CECT 5083, DSM 13754, T. viridans, Thalassomonas viridans Macian et al. 2001, strain XOM25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.