Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJE44493.1 | KJE44494.1 | SG34_22755 | SG34_22760 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Peptidase M13; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.610 |
KJE44494.1 | KJE44493.1 | SG34_22760 | SG34_22755 | Peptidase M13; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.610 |
KJE44494.1 | KJE45007.1 | SG34_22760 | SG34_19690 | Peptidase M13; Derived by automated computational analysis using gene prediction method: Protein Homology. | Prolyl endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.411 |
KJE44494.1 | KJE47678.1 | SG34_22760 | SG34_05205 | Peptidase M13; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidyl-dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.486 |
KJE44494.1 | KJE47692.1 | SG34_22760 | SG34_05285 | Peptidase M13; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.456 |
KJE44494.1 | polA | SG34_22760 | SG34_17375 | Peptidase M13; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.606 |
KJE44494.1 | ruvB | SG34_22760 | SG34_15825 | Peptidase M13; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.693 |
KJE45007.1 | KJE44494.1 | SG34_19690 | SG34_22760 | Prolyl endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase M13; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.411 |
KJE47678.1 | KJE44494.1 | SG34_05205 | SG34_22760 | Peptidyl-dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase M13; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.486 |
KJE47692.1 | KJE44494.1 | SG34_05285 | SG34_22760 | Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase M13; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.456 |
polA | KJE44494.1 | SG34_17375 | SG34_22760 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Peptidase M13; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.606 |
polA | ruvB | SG34_17375 | SG34_15825 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.614 |
ruvB | KJE44494.1 | SG34_15825 | SG34_22760 | ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | Peptidase M13; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.693 |
ruvB | polA | SG34_15825 | SG34_17375 | ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.614 |