Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJE43689.1 | KJE44042.1 | SG34_25785 | SG34_25370 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. | 0.418 |
KJE44040.1 | KJE44042.1 | SG34_25360 | SG34_25370 | Betaine-aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. | Specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. | 0.431 |
KJE44040.1 | betI | SG34_25360 | SG34_25365 | Betaine-aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. | BetI family transcriptional regulator; Repressor involved in choline regulation of the bet genes. | 0.936 |
KJE44042.1 | KJE43689.1 | SG34_25370 | SG34_25785 | Specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.418 |
KJE44042.1 | KJE44040.1 | SG34_25370 | SG34_25360 | Specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. | Betaine-aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. | 0.431 |
KJE44042.1 | KJE44043.1 | SG34_25370 | SG34_25375 | Specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. | Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.917 |
KJE44042.1 | KJE47805.1 | SG34_25370 | SG34_04280 | Specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. | Acetylserine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.446 |
KJE44042.1 | betI | SG34_25370 | SG34_25365 | Specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. | BetI family transcriptional regulator; Repressor involved in choline regulation of the bet genes. | 0.532 |
KJE44043.1 | KJE44042.1 | SG34_25375 | SG34_25370 | Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. | 0.917 |
KJE44043.1 | KJE47805.1 | SG34_25375 | SG34_04280 | Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetylserine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.436 |
KJE47805.1 | KJE44042.1 | SG34_04280 | SG34_25370 | Acetylserine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. | 0.446 |
KJE47805.1 | KJE44043.1 | SG34_04280 | SG34_25375 | Acetylserine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.436 |
betI | KJE44040.1 | SG34_25365 | SG34_25360 | BetI family transcriptional regulator; Repressor involved in choline regulation of the bet genes. | Betaine-aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. | 0.936 |
betI | KJE44042.1 | SG34_25365 | SG34_25370 | BetI family transcriptional regulator; Repressor involved in choline regulation of the bet genes. | Specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. | 0.532 |