STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJE42262.1Acetoin utilization protein AcuC; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)    
Predicted Functional Partners:
rapA
ATP-dependent helicase; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily.
    
 0.966
KJE44328.1
Vegetatible incompatibility protein HET-E-1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.931
KJE46079.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.919
KJE48019.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.853
KJE47156.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.853
KJE47216.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.853
KJE40324.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.853
KJE37723.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.853
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
    
 0.848
KJE40550.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.848
Your Current Organism:
Thalassomonas viridans
NCBI taxonomy Id: 137584
Other names: CECT 5083, DSM 13754, T. viridans, Thalassomonas viridans Macian et al. 2001, strain XOM25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.