STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ45668.1Protein of unknown function. (91 aa)    
Predicted Functional Partners:
SDJ45631.1
Protein-S-isoprenylcysteine O-methyltransferase Ste14.
 
    0.951
SDJ45703.1
Hypothetical protein.
 
     0.918
SDJ45738.1
40-residue YVTN family beta-propeller repeat-containing protein.
       0.692
SDK77684.1
Two-component system, OmpR family, heavy metal sensor histidine kinase CusS; Member of a two-component regulatory system.
  
     0.519
SDJ44852.1
Two-component system, OmpR family, heavy metal sensor histidine kinase CusS; Member of a two-component regulatory system.
 
     0.494
SDJ45345.1
Cytochrome C oxidase, cbb3-type, subunit III.
  
     0.485
SDK48104.1
Hypothetical protein.
  
     0.482
SDJ59680.1
Resolvase, N terminal domain.
  
     0.468
SDJ45310.1
Copper resistance protein B.
 
     0.452
SDJ45586.1
Hypothetical protein.
       0.430
Your Current Organism:
Pseudomonas indica
NCBI taxonomy Id: 137658
Other names: DSM 14015, JCM 21544, LMG 23066, LMG:23066, MTCC 3713, NBRC 103045, P. indica, Pseudomonas indica Pandey et al. 2002, Pseudomonas sp. IMT37, Pseudomonas sp. IMT40, strain IMT37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.