Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDJ28430.1 | SDJ28604.1 | SAMN05216186_10157 | SAMN05216186_10162 | Aspartyl protease family protein. | Hypothetical protein. | 0.496 |
SDJ28430.1 | cpdA | SAMN05216186_10157 | SAMN05216186_10161 | Aspartyl protease family protein. | Icc protein; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes. | 0.540 |
SDJ28604.1 | SDJ28430.1 | SAMN05216186_10162 | SAMN05216186_10157 | Hypothetical protein. | Aspartyl protease family protein. | 0.496 |
SDJ28604.1 | SDJ28649.1 | SAMN05216186_10162 | SAMN05216186_10163 | Hypothetical protein. | ADP-ribose pyrophosphatase. | 0.913 |
SDJ28604.1 | SDJ38288.1 | SAMN05216186_10162 | SAMN05216186_101303 | Hypothetical protein. | Regulator of sigma D; Belongs to the Rsd/AlgQ family. | 0.635 |
SDJ28604.1 | SDK46794.1 | SAMN05216186_10162 | SAMN05216186_107123 | Hypothetical protein. | Protein of unknown function. | 0.635 |
SDJ28604.1 | SDK46835.1 | SAMN05216186_10162 | SAMN05216186_107124 | Hypothetical protein. | Protein of unknown function. | 0.601 |
SDJ28604.1 | SDK83511.1 | SAMN05216186_10162 | SAMN05216186_1116 | Hypothetical protein. | SH3 domain protein. | 0.634 |
SDJ28604.1 | SDL13527.1 | SAMN05216186_10162 | SAMN05216186_11572 | Hypothetical protein. | Antitoxin CptB. | 0.527 |
SDJ28604.1 | cpdA | SAMN05216186_10162 | SAMN05216186_10161 | Hypothetical protein. | Icc protein; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes. | 0.656 |
SDJ28604.1 | rmf | SAMN05216186_10162 | SAMN05216186_104202 | Hypothetical protein. | Ribosome modulation factor; During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes); Belongs to the ribosome modulation factor family. | 0.704 |
SDJ28604.1 | thiC | SAMN05216186_10162 | SAMN05216186_10164 | Hypothetical protein. | Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.518 |
SDJ28649.1 | SDJ28604.1 | SAMN05216186_10163 | SAMN05216186_10162 | ADP-ribose pyrophosphatase. | Hypothetical protein. | 0.913 |
SDJ28649.1 | cpdA | SAMN05216186_10163 | SAMN05216186_10161 | ADP-ribose pyrophosphatase. | Icc protein; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes. | 0.729 |
SDJ28649.1 | thiC | SAMN05216186_10163 | SAMN05216186_10164 | ADP-ribose pyrophosphatase. | Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.557 |
SDJ38288.1 | SDJ28604.1 | SAMN05216186_101303 | SAMN05216186_10162 | Regulator of sigma D; Belongs to the Rsd/AlgQ family. | Hypothetical protein. | 0.635 |
SDJ38288.1 | SDK46794.1 | SAMN05216186_101303 | SAMN05216186_107123 | Regulator of sigma D; Belongs to the Rsd/AlgQ family. | Protein of unknown function. | 0.729 |
SDJ38288.1 | SDK46835.1 | SAMN05216186_101303 | SAMN05216186_107124 | Regulator of sigma D; Belongs to the Rsd/AlgQ family. | Protein of unknown function. | 0.709 |
SDJ38288.1 | rmf | SAMN05216186_101303 | SAMN05216186_104202 | Regulator of sigma D; Belongs to the Rsd/AlgQ family. | Ribosome modulation factor; During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes); Belongs to the ribosome modulation factor family. | 0.554 |
SDK46794.1 | SDJ28604.1 | SAMN05216186_107123 | SAMN05216186_10162 | Protein of unknown function. | Hypothetical protein. | 0.635 |
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