STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ59754.1Hypothetical protein. (90 aa)    
Predicted Functional Partners:
SDJ59789.1
DNA adenine methylase.
       0.773
SDJ59819.1
Hypothetical protein.
       0.773
SDJ59850.1
DNA (cytosine-5)-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
       0.773
SDJ59891.1
Hypothetical protein.
       0.773
SDJ59720.1
Hypothetical protein.
       0.568
SDJ59926.1
Hypothetical protein.
       0.400
SDJ59956.1
Hypothetical protein.
       0.400
SDJ59991.1
Hypothetical protein.
       0.400
SDJ60024.1
Hypothetical protein.
       0.400
SDJ60053.1
Hypothetical protein.
       0.400
Your Current Organism:
Pseudomonas indica
NCBI taxonomy Id: 137658
Other names: DSM 14015, JCM 21544, LMG 23066, LMG:23066, MTCC 3713, NBRC 103045, P. indica, Pseudomonas indica Pandey et al. 2002, Pseudomonas sp. IMT37, Pseudomonas sp. IMT40, strain IMT37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.