STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK46422.1Protein of unknown function. (668 aa)    
Predicted Functional Partners:
SDK46467.1
Protein of unknown function.
 
    0.941
SDK46505.1
Uncharacterized protein.
 
    0.895
SDJ90101.1
Protein of unknown function.
 
    0.859
SDK60506.1
Protein of unknown function.
 
    0.859
SDK79851.1
Protein of unknown function.
 
    0.859
SDL40232.1
Protein of unknown function.
 
    0.859
SDL62732.1
Protein of unknown function.
 
    0.859
SDL96104.1
Protein of unknown function.
 
    0.859
SDJ40069.1
Protein of unknown function.
 
    0.858
SDK79814.1
Uncharacterized protein.
 
    0.852
Your Current Organism:
Pseudomonas indica
NCBI taxonomy Id: 137658
Other names: DSM 14015, JCM 21544, LMG 23066, LMG:23066, MTCC 3713, NBRC 103045, P. indica, Pseudomonas indica Pandey et al. 2002, Pseudomonas sp. IMT37, Pseudomonas sp. IMT40, strain IMT37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.