STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK68236.1DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. (419 aa)    
Predicted Functional Partners:
SDK68092.1
Hypothetical protein.
     0.957
SDK68205.1
DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
0.912
SDK68172.1
Hypothetical protein.
 
     0.878
SDK68060.1
AAA domain-containing protein.
 
   
 0.877
SDK68130.1
Hypothetical protein.
 
     0.877
rsmG
16S rRNA (guanine527-N7)-methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.874
SDJ30574.1
Chromosome partitioning protein.
  
 
 0.861
SDK58951.1
Chromosome partitioning protein.
  
 
 0.861
SDL61187.1
Chromosome segregation ATPase.
  
 
 0.861
SDK67495.1
Site-specific DNA recombinase.
 
   
 0.858
Your Current Organism:
Pseudomonas indica
NCBI taxonomy Id: 137658
Other names: DSM 14015, JCM 21544, LMG 23066, LMG:23066, MTCC 3713, NBRC 103045, P. indica, Pseudomonas indica Pandey et al. 2002, Pseudomonas sp. IMT37, Pseudomonas sp. IMT40, strain IMT37
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