STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ44154.1Hypothetical protein. (127 aa)    
Predicted Functional Partners:
SDJ44110.1
Putative copper resistance protein D.
 
  
 0.972
SDK19057.1
Hypothetical protein.
  
    0.879
SDL00624.1
Sulfide:quinone oxidoreductase.
  
 
   0.838
SDL17893.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
    
   0.815
SDL68744.1
2,4-dienoyl-CoA reductase.
    
   0.815
SDM02461.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
   0.815
SDJ91887.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
   
 
 0.740
SDJ31509.1
Cytochrome C oxidase, cbb3-type, subunit III.
    
   0.728
SDJ45345.1
Cytochrome C oxidase, cbb3-type, subunit III.
    
   0.728
SDK93503.1
Cytochrome c oxidase, cbb3-type, subunit III.
    
   0.728
Your Current Organism:
Pseudomonas indica
NCBI taxonomy Id: 137658
Other names: DSM 14015, JCM 21544, LMG 23066, LMG:23066, MTCC 3713, NBRC 103045, P. indica, Pseudomonas indica Pandey et al. 2002, Pseudomonas sp. IMT37, Pseudomonas sp. IMT40, strain IMT37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.