STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZL_008860Protein; GtrA family. (140 aa)    
Predicted Functional Partners:
AZL_008870
Glycosyl transferase family 2.
 
     0.940
AZL_006300
Hypothetical protein; Similar to succinylglutamate desuccinylase/aspartoacylase.
  
     0.636
AZL_002880
Hypothetical protein.
  
 
 0.629
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
  
    0.545
AZL_008840
miaB-like tRNA modifying enzyme.
       0.544
AZL_013220
Hypothetical protein.
  
     0.515
ftsY
Signal recognition particle receptor; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.
       0.507
AZL_008880
Hypothetical protein.
       0.489
AZL_024800
Hypothetical protein.
  
     0.485
wza-2
Polysaccharide export outer membrane protein.
 
  
 0.476
Your Current Organism:
Azospirillum sp. B510
NCBI taxonomy Id: 137722
Other names: A. sp. B510, Azospirillum lipoferum B510
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