STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nifTNitrogen fixation protein. (69 aa)    
Predicted Functional Partners:
AZL_022570
Hypothetical protein.
 
    0.924
nifZ
Nitrogen fixation protein.
 
  
 0.922
AZL_022500
LRV FeS4 cluster domain protein.
 
    0.887
AZL_022520
nifZ protein.
 
     0.881
nifW
Nitrogen fixation protein; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.
 
  
 0.840
nifX
Nitrogen fixation protein.
 
  
 0.838
AZL_007630
Hypothetical protein.
 
    0.837
nifB
Nitrogen fixation protein.
 
  
 0.827
AZL_022550
Hypothetical protein.
       0.791
AZL_022490
Hypothetical protein.
 
     0.774
Your Current Organism:
Azospirillum sp. B510
NCBI taxonomy Id: 137722
Other names: A. sp. B510, Azospirillum lipoferum B510
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.