STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ60470.1Putative ABC transport system ATP-binding protein. (254 aa)    
Predicted Functional Partners:
SER19245.1
Putative ABC transport system permease protein.
 
 0.999
SEQ60434.1
Putative ABC transport system permease protein.
 
 0.995
SER00285.1
Putative ABC transport system permease protein.
 0.992
SEQ79702.1
ABC-2 type transport system ATP-binding protein.
 
0.930
SEQ90102.1
ATP-binding cassette, subfamily B.
     
0.900
SER44534.1
ATP-binding cassette, subfamily B.
     
0.900
SEQ89192.1
ABC-2 type transport system ATP-binding protein.
 
0.897
SEQ86847.1
ATP-binding cassette, subfamily B/ATP-binding cassette, subfamily B, tetracycline resistant protein.
     
0.892
SEQ60364.1
Hypothetical protein.
 
  
 0.890
SEQ61142.1
ABC-2 type transport system ATP-binding protein.
 
0.873
Your Current Organism:
Granulicatella balaenopterae
NCBI taxonomy Id: 137733
Other names: ATCC 700813, Abiotrophia balaenopterae, CCUG 37380, CIP 105938, DSM 15827, G. balaenopterae, strain M1975/96/1
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