STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ69543.1D-methionine transport system substrate-binding protein; Belongs to the nlpA lipoprotein family. (273 aa)    
Predicted Functional Partners:
metN
D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 0.999
SEQ69615.1
D-methionine transport system permease protein.
 0.999
SER45976.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
    
   0.588
SER46869.1
NADPH-dependent glutamate synthase beta chain.
   
  
 0.555
SEQ87223.1
Putative lysine transport system permease protein.
  
 
 0.534
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
  
 0.468
SEQ69648.1
Hypothetical protein.
       0.421
SER23017.1
Putative ABC transport system ATP-binding protein.
 
 
  0.415
SEQ60470.1
Putative ABC transport system ATP-binding protein.
 
 
  0.411
SEQ61415.1
Putative ABC transport system ATP-binding protein.
 
 
  0.411
Your Current Organism:
Granulicatella balaenopterae
NCBI taxonomy Id: 137733
Other names: ATCC 700813, Abiotrophia balaenopterae, CCUG 37380, CIP 105938, DSM 15827, G. balaenopterae, strain M1975/96/1
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