STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ74710.1N-acetylmuramoyl-L-alanine amidase. (280 aa)    
Predicted Functional Partners:
SEQ74743.1
Holin, phi29 family.
  
  
 0.820
SEQ53629.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.800
SEQ74796.1
Hypothetical protein.
       0.550
SEQ75779.1
Phage putative head morphogenesis protein, SPP1 gp7 family.
  
 
 0.528
SEQ74976.1
Uncharacterized phage protein gp47/JayE.
  
  
 0.521
SEQ74662.1
Uncharacterized phage-associated protein.
       0.510
SEQ74618.1
Hypothetical protein.
       0.503
SEQ75015.1
Protein of unknown function.
  
    0.491
SEQ75155.1
LysM domain-containing protein.
  
  
 0.489
SEQ74889.1
Hypothetical protein.
       0.461
Your Current Organism:
Granulicatella balaenopterae
NCBI taxonomy Id: 137733
Other names: ATCC 700813, Abiotrophia balaenopterae, CCUG 37380, CIP 105938, DSM 15827, G. balaenopterae, strain M1975/96/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.