SEQ84093.1 protein (Granulicatella balaenopterae)

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second shell of interactors

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

SEQ84093.1

Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. (708 aa)

Predicted Functional Partners:

SEQ84136.1

0.984

SEQ84051.1

0.773

SER36009.1

0.771

SEQ69364.1

0.495

SEQ84173.1

0.413

Your Current Organism:

Granulicatella balaenopterae

NCBI taxonomy Id: 137733
Other names: ATCC 700813, Abiotrophia balaenopterae, CCUG 37380, CIP 105938, DSM 15827, G. balaenopterae, strain M1975/96/1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SEQ69364.1	SEQ84093.1	SAMN05421767_10453	SAMN05421767_10842	Cu+-exporting ATPase.	Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.	0.495
SEQ84051.1	SEQ84093.1	SAMN05421767_10841	SAMN05421767_10842	Hypothetical protein.	Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.	0.773
SEQ84051.1	SEQ84136.1	SAMN05421767_10841	SAMN05421767_10843	Hypothetical protein.	Ferrous iron transport protein A.	0.773
SEQ84051.1	SEQ84173.1	SAMN05421767_10841	SAMN05421767_10844	Hypothetical protein.	Hypothetical protein.	0.413
SEQ84093.1	SEQ69364.1	SAMN05421767_10842	SAMN05421767_10453	Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.	Cu+-exporting ATPase.	0.495
SEQ84093.1	SEQ84051.1	SAMN05421767_10842	SAMN05421767_10841	Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.	Hypothetical protein.	0.773
SEQ84093.1	SEQ84136.1	SAMN05421767_10842	SAMN05421767_10843	Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.	Ferrous iron transport protein A.	0.984
SEQ84093.1	SEQ84173.1	SAMN05421767_10842	SAMN05421767_10844	Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.	Hypothetical protein.	0.413
SEQ84093.1	SER36009.1	SAMN05421767_10842	SAMN05421767_14014	Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.	Ferrous iron transport protein A.	0.771
SEQ84136.1	SEQ84051.1	SAMN05421767_10843	SAMN05421767_10841	Ferrous iron transport protein A.	Hypothetical protein.	0.773
SEQ84136.1	SEQ84093.1	SAMN05421767_10843	SAMN05421767_10842	Ferrous iron transport protein A.	Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.	0.984
SEQ84136.1	SEQ84173.1	SAMN05421767_10843	SAMN05421767_10844	Ferrous iron transport protein A.	Hypothetical protein.	0.413
SEQ84173.1	SEQ84051.1	SAMN05421767_10844	SAMN05421767_10841	Hypothetical protein.	Hypothetical protein.	0.413
SEQ84173.1	SEQ84093.1	SAMN05421767_10844	SAMN05421767_10842	Hypothetical protein.	Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.	0.413
SEQ84173.1	SEQ84136.1	SAMN05421767_10844	SAMN05421767_10843	Hypothetical protein.	Ferrous iron transport protein A.	0.413
SER36009.1	SEQ84093.1	SAMN05421767_14014	SAMN05421767_10842	Ferrous iron transport protein A.	Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.	0.771

Network Stats

number of nodes:

10

number of edges:

19

average node degree:

3.8

avg. local clustering coefficient:

0.748

expected number of edges:

9

PPI enrichment p-value:

0.0043

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006412

Translation

9 of 133

1.68

3.48

1.37e-11

GO:0009059

Macromolecule biosynthetic process

10 of 385

1.26

1.97

3.16e-10

GO:0044271

Cellular nitrogen compound biosynthetic process

10 of 563

1.1

1.45

7.35e-09

GO:0044249

Cellular biosynthetic process

11 of 1106

0.85

0.92

7.54e-08

GO:1901576

Organic substance biosynthetic process

11 of 1134

0.84

0.9

9.01e-08

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0003735

Structural constituent of ribosome

9 of 60

2.03

5.47

9.12e-15

GO:0019843

rRNA binding

8 of 45

2.1

5.39

1.23e-13

GO:0003723

RNA binding

9 of 121

1.72

3.84

8.73e-13

GO:0000049

tRNA binding

3 of 22

1.98

1.6

0.00068

GO:1901363

Heterocyclic compound binding

10 of 2205

0.51

0.39

0.0034

(more ...)

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005840

Ribosome

9 of 64

2.0

5.49

2.69e-15

GO:0015935

Small ribosomal subunit

4 of 7

2.61

4.07

1.75e-08

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:2498

Structural constituent of ribosome

9 of 70

1.96

4.99

6.48e-14

CL:2500

Structural constituent of ribosome

7 of 62

1.9

3.93

1.21e-10

CL:2613

Small ribosomal subunit, and Initiation factor

3 of 5

2.63

2.62

1.32e-05

CL:2506

Structural constituent of ribosome

4 of 47

1.78

1.93

5.50e-05

CL:2507

Structural constituent of ribosome

3 of 33

1.81

1.39

0.0014

(more ...)

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map03010

Ribosome

9 of 68

1.97

5.33

4.43e-15

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0022627

Cytosolic small ribosomal subunit

4 of 7

2.61

3.66

1.20e-07

GOCC:0005840

Ribosome

6 of 46

1.97

3.48

1.01e-08

GOCC:0043229

Intracellular organelle

9 of 634

1.0

1.15

5.42e-07

GOCC:0005737

Cytoplasm

9 of 1865

0.53

0.42

0.0025

GOCC:0005622

Intracellular

11 of 2689

0.46

0.4

0.00026

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0699

rRNA-binding

8 of 44

2.11

5.62

2.82e-14

KW-0689

Ribosomal protein

9 of 72

1.95

5.13

1.13e-14

KW-0820

tRNA-binding

2 of 13

2.04

1.08

0.0088

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