STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ90001.1Putative cell wall binding repeat-containing protein. (319 aa)    
Predicted Functional Partners:
SEQ90033.1
Hypothetical protein.
       0.773
SEQ69285.1
CTP:phosphocholine cytidylyltransferase.
 
    0.765
SEQ69328.1
CTP:phosphocholine cytidylyltransferase.
 
    0.646
SER45913.1
Glycosidase; Belongs to the glycosyl hydrolase 13 family.
    
 0.592
SEQ89922.1
Beta-lactamase class A.
  
 
 
0.536
SEQ90062.1
Hypothetical protein.
       0.432
Your Current Organism:
Granulicatella balaenopterae
NCBI taxonomy Id: 137733
Other names: ATCC 700813, Abiotrophia balaenopterae, CCUG 37380, CIP 105938, DSM 15827, G. balaenopterae, strain M1975/96/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.