Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ93592.1 | SEQ93626.1 | SAMN05421767_11154 | SAMN05421767_11155 | RNA polymerase sigma factor, sigma-70 family. | Hypothetical protein. | 0.634 |
SEQ93592.1 | SEQ93664.1 | SAMN05421767_11154 | SAMN05421767_11156 | RNA polymerase sigma factor, sigma-70 family. | Protein of unknown function. | 0.534 |
SEQ93626.1 | SEQ93592.1 | SAMN05421767_11155 | SAMN05421767_11154 | Hypothetical protein. | RNA polymerase sigma factor, sigma-70 family. | 0.634 |
SEQ93626.1 | SEQ93664.1 | SAMN05421767_11155 | SAMN05421767_11156 | Hypothetical protein. | Protein of unknown function. | 0.645 |
SEQ93626.1 | SEQ93699.1 | SAMN05421767_11155 | SAMN05421767_11157 | Hypothetical protein. | Peptidoglycan hydrolase. | 0.460 |
SEQ93664.1 | SEQ93592.1 | SAMN05421767_11156 | SAMN05421767_11154 | Protein of unknown function. | RNA polymerase sigma factor, sigma-70 family. | 0.534 |
SEQ93664.1 | SEQ93626.1 | SAMN05421767_11156 | SAMN05421767_11155 | Protein of unknown function. | Hypothetical protein. | 0.645 |
SEQ93664.1 | SEQ93699.1 | SAMN05421767_11156 | SAMN05421767_11157 | Protein of unknown function. | Peptidoglycan hydrolase. | 0.542 |
SEQ93699.1 | SEQ93626.1 | SAMN05421767_11157 | SAMN05421767_11155 | Peptidoglycan hydrolase. | Hypothetical protein. | 0.460 |
SEQ93699.1 | SEQ93664.1 | SAMN05421767_11157 | SAMN05421767_11156 | Peptidoglycan hydrolase. | Protein of unknown function. | 0.542 |