STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER15839.1Unsaturated chondroitin disaccharide hydrolase. (395 aa)    
Predicted Functional Partners:
SER15988.1
Glucan-binding domain-containing protein (YG repeat).
 
  
 0.941
SER15898.1
PTS system, N-acetylgalactosamine-specific IIC component.
 
  
 0.926
SER15958.1
Heparinase II/III N-terminus.
 
    0.919
SER15867.1
PTS system, N-acetylgalactosamine-specific IIB component.
 
   
 0.910
SER15929.1
PTS system IID component, Man family.
 
    0.900
SER15782.1
Hypothetical protein.
 
     0.855
SER15750.1
Gluconate 5-dehydrogenase.
 
   
 0.831
kduI
4-deoxy-L-threo-5-hexulose uronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
   
 0.755
SER15646.1
2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase.
 
  
 0.724
SER16015.1
PTS system, N-acetylgalactosamine-specific IIA component.
  
  
 0.621
Your Current Organism:
Granulicatella balaenopterae
NCBI taxonomy Id: 137733
Other names: ATCC 700813, Abiotrophia balaenopterae, CCUG 37380, CIP 105938, DSM 15827, G. balaenopterae, strain M1975/96/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.