node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ58512.1 | SER17755.1 | SAMN05421767_10223 | SAMN05421767_12322 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Exodeoxyribonuclease-3. | 0.978 |
SEQ58512.1 | SER33336.1 | SAMN05421767_10223 | SAMN05421767_13716 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.798 |
SEQ58512.1 | birA | SAMN05421767_10223 | SAMN05421767_10928 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.485 |
SEQ58512.1 | nth | SAMN05421767_10223 | SAMN05421767_11124 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.741 |
SEQ58512.1 | polA | SAMN05421767_10223 | SAMN05421767_10348 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.450 |
SEQ93219.1 | SER17755.1 | SAMN05421767_11144 | SAMN05421767_12322 | Ribosomal small subunit pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family. | Exodeoxyribonuclease-3. | 0.828 |
SER17755.1 | SEQ58512.1 | SAMN05421767_12322 | SAMN05421767_10223 | Exodeoxyribonuclease-3. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.978 |
SER17755.1 | SEQ93219.1 | SAMN05421767_12322 | SAMN05421767_11144 | Exodeoxyribonuclease-3. | Ribosomal small subunit pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family. | 0.828 |
SER17755.1 | SER33336.1 | SAMN05421767_12322 | SAMN05421767_13716 | Exodeoxyribonuclease-3. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.982 |
SER17755.1 | birA | SAMN05421767_12322 | SAMN05421767_10928 | Exodeoxyribonuclease-3. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.869 |
SER17755.1 | nfo | SAMN05421767_12322 | SAMN05421767_10151 | Exodeoxyribonuclease-3. | Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.927 |
SER17755.1 | nth | SAMN05421767_12322 | SAMN05421767_11124 | Exodeoxyribonuclease-3. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.998 |
SER17755.1 | polA | SAMN05421767_12322 | SAMN05421767_10348 | Exodeoxyribonuclease-3. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.970 |
SER17755.1 | rpoZ | SAMN05421767_12322 | SAMN05421767_11525 | Exodeoxyribonuclease-3. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.740 |
SER17755.1 | tadA | SAMN05421767_12322 | SAMN05421767_11833 | Exodeoxyribonuclease-3. | tRNA-adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.819 |
SER17755.1 | ung | SAMN05421767_12322 | SAMN05421767_11149 | Exodeoxyribonuclease-3. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.953 |
SER33336.1 | SEQ58512.1 | SAMN05421767_13716 | SAMN05421767_10223 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.798 |
SER33336.1 | SER17755.1 | SAMN05421767_13716 | SAMN05421767_12322 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Exodeoxyribonuclease-3. | 0.982 |
SER33336.1 | polA | SAMN05421767_13716 | SAMN05421767_10348 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.999 |
SER33336.1 | ung | SAMN05421767_13716 | SAMN05421767_11149 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.825 |