STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER17245.1Zinc transport system permease protein. (275 aa)    
Predicted Functional Partners:
SER17204.1
Zinc transport system ATP-binding protein.
 0.999
SEQ82425.1
Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.995
SEQ84839.1
Iron/zinc/copper transport system ATP-binding protein.
 0.982
SEQ54768.1
Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.967
SEQ84767.1
Iron/zinc/copper transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.954
SEQ84801.1
Iron/zinc/copper transport system permease protein.
 
  
 
0.758
SER27838.1
Iron (metal) dependent repressor, DtxR family.
  
 
 0.644
SEQ87223.1
Putative lysine transport system permease protein.
  
 
 0.583
SER23722.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
    
  0.507
rlmH
23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
       0.471
Your Current Organism:
Granulicatella balaenopterae
NCBI taxonomy Id: 137733
Other names: ATCC 700813, Abiotrophia balaenopterae, CCUG 37380, CIP 105938, DSM 15827, G. balaenopterae, strain M1975/96/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.