STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER20007.1Phosphoribosyl 1,2-cyclic phosphodiesterase. (271 aa)    
Predicted Functional Partners:
SER20027.1
Two-component signal transduction system YycFG, regulatory protein YycI.
  
  
 0.844
SER20048.1
Two-component signal transduction system YycFG, regulatory protein YycH.
  
  
 0.843
SER20079.1
PAS/PAC sensor signal transduction histidine kinase.
  
  
 0.795
SER20104.1
Two-component system, OmpR family, response regulator VicR.
  
  
 0.717
SER54527.1
Uncharacterized protein YoxC, contains an MCP-like domain.
   
    0.643
SER19990.1
Serine protease Do.
  
  
 0.631
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
 0.536
SEQ60404.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
  
 0.449
SEQ65713.1
Two-component system, OmpR family, response regulator ResD.
  
  
 0.449
SER19390.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
  
 0.449
Your Current Organism:
Granulicatella balaenopterae
NCBI taxonomy Id: 137733
Other names: ATCC 700813, Abiotrophia balaenopterae, CCUG 37380, CIP 105938, DSM 15827, G. balaenopterae, strain M1975/96/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.