STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER25742.1YceG-like family protein. (174 aa)    
Predicted Functional Partners:
SER25718.1
Hypothetical protein.
       0.776
SEQ92182.1
Uncharacterized protein YpiB, UPF0302 family.
  
     0.723
SER54499.1
Gas vesicle protein.
  
    0.658
SER25690.1
Cell elongation-specific peptidoglycan D,D-transpeptidase.
 
   
 0.641
SEQ65638.1
Uncharacterized protein YpbB.
  
     0.587
SER02454.1
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB.
 
  
 0.574
SER25780.1
Thiamine transporter.
       0.529
SER07837.1
Rod shape-determining protein MreD.
 
  
 0.525
SEQ71733.1
Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family.
 
     0.519
SEQ94853.1
Cell fate regulator YmcA, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family.
  
     0.512
Your Current Organism:
Granulicatella balaenopterae
NCBI taxonomy Id: 137733
Other names: ATCC 700813, Abiotrophia balaenopterae, CCUG 37380, CIP 105938, DSM 15827, G. balaenopterae, strain M1975/96/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.