STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER37726.1DNA helicase/exodeoxyribonuclease V, subunit B; ATP-dependent DNA helicase. (1236 aa)    
Predicted Functional Partners:
addA
DNA helicase/exodeoxyribonuclease V, subunit A; ATP-dependent DNA helicase.
 
 
 0.999
SER41914.1
tRNA (adenine22-N1)-methyltransferase.
 
     0.695
SEQ93187.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.531
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
 
     0.506
SER37693.1
Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains.
       0.475
SER37665.1
Catechol-2,3-dioxygenase.
       0.473
SEQ52936.1
Exonuclease RecJ.
     
 0.458
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
     0.452
SEQ57655.1
Adapter protein MecA 1/2; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family.
  
   
 0.432
SER45001.1
3D (Asp-Asp-Asp) domain-containing protein.
  
     0.423
Your Current Organism:
Granulicatella balaenopterae
NCBI taxonomy Id: 137733
Other names: ATCC 700813, Abiotrophia balaenopterae, CCUG 37380, CIP 105938, DSM 15827, G. balaenopterae, strain M1975/96/1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.