STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
addADNA helicase/exodeoxyribonuclease V, subunit A; ATP-dependent DNA helicase. (1254 aa)    
Predicted Functional Partners:
SER37726.1
DNA helicase/exodeoxyribonuclease V, subunit B; ATP-dependent DNA helicase.
 
 
 0.999
recD2
ATP-dependent DNA helicase, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.
  
 
 0.894
SER41914.1
tRNA (adenine22-N1)-methyltransferase.
 
     0.709
SEQ65601.1
ATP-dependent DNA helicase RecQ.
    
 0.698
ligA
DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.
  
 
 0.692
SER18781.1
ATP-dependent DNA helicase PcrA.
 
 
0.689
SER34159.1
DNA helicase-2 / ATP-dependent DNA helicase PcrA.
 
  
 0.680
recA
Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 
 0.637
SER24544.1
LssY C-terminus.
  
 
 0.588
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
 
   
 0.581
Your Current Organism:
Granulicatella balaenopterae
NCBI taxonomy Id: 137733
Other names: ATCC 700813, Abiotrophia balaenopterae, CCUG 37380, CIP 105938, DSM 15827, G. balaenopterae, strain M1975/96/1
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