STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER40256.1Dihydroorotase. (367 aa)    
Predicted Functional Partners:
SER40226.1
Conserved hypothetical protein EF_0833/AHA_3914.
     0.985
SER40287.1
L-seryl-tRNA(Ser) seleniumtransferase.
 
  
 0.977
SER40315.1
Conserved hypothetical protein EF_0839/AHA_3917.
 
    0.949
SER40195.1
Conserved hypothetical protein EF_0832/AHA_3913.
 
     0.933
SER40137.1
Conserved hypothetical protein EF_0830/AHA_3911.
 
     0.921
SER40067.1
Transcriptional antiterminator, BglG family.
 
     0.865
SER40163.1
Conserved hypothetical protein EF_0831/AHA_3912.
       0.674
SER40110.1
PRD domain protein EF_0829/AHA_3910.
       0.667
SER40351.1
Integrase core domain-containing protein.
       0.580
Your Current Organism:
Granulicatella balaenopterae
NCBI taxonomy Id: 137733
Other names: ATCC 700813, Abiotrophia balaenopterae, CCUG 37380, CIP 105938, DSM 15827, G. balaenopterae, strain M1975/96/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.