STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER44000.1Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (350 aa)    
Predicted Functional Partners:
SER43939.1
Oligopeptide transport system permease protein.
 0.999
SER43970.1
Oligopeptide transport system permease protein.
 
 0.999
SER44042.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
0.998
SEQ58230.1
Peptide/nickel transport system permease protein.
 
 0.990
SEQ68990.1
Oligopeptide transport system substrate-binding protein.
 
 0.988
SEQ58312.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
0.947
SEQ58268.1
Peptide/nickel transport system permease protein.
 0.924
SEQ61222.1
ABC-type glutathione transport system ATPase component, contains duplicated ATPase domain.
  
 
0.803
SEQ79828.1
Energy-coupling factor transporter ATP-binding protein EcfA2.
  
 
0.787
SEQ90571.1
Putative ABC transport system ATP-binding protein.
 
     
0.737
Your Current Organism:
Granulicatella balaenopterae
NCBI taxonomy Id: 137733
Other names: ATCC 700813, Abiotrophia balaenopterae, CCUG 37380, CIP 105938, DSM 15827, G. balaenopterae, strain M1975/96/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.