STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER46869.1NADPH-dependent glutamate synthase beta chain. (980 aa)    
Predicted Functional Partners:
SER21364.1
Dihydrolipoamide dehydrogenase.
  
 0.969
SEQ87464.1
L-glutamine synthetase.
  
 
 0.952
SER09936.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
  
 
 0.952
fumC
Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 0.952
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 0.950
SEQ97388.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
 
 0.943
SEQ84970.1
Glycine/D-amino acid oxidase.
  
 
 0.942
SEQ95783.1
Biotin carboxylase.
  
 
 0.939
SEQ66063.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.938
glmS
Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.937
Your Current Organism:
Granulicatella balaenopterae
NCBI taxonomy Id: 137733
Other names: ATCC 700813, Abiotrophia balaenopterae, CCUG 37380, CIP 105938, DSM 15827, G. balaenopterae, strain M1975/96/1
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