STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001458595_00820Unannotated protein. (556 aa)    
Predicted Functional Partners:
GCA_001458595_00821
Unannotated protein.
     0.994
GCA_001458595_00822
Unannotated protein.
      0.976
GCA_001458595_00823
Unannotated protein.
      0.938
GCA_001458595_01241
Unannotated protein.
  
  
 0.871
CQ394_11665
Unannotated protein; Converts alpha-aldose to the beta-anomer.
 
 
 0.854
CQ394_18465
Unannotated protein; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.834
CQ394_13825
Unannotated protein.
     
 0.789
CQ394_18365
Unannotated protein.
  
  
 0.754
CQ394_11860
Unannotated protein; Belongs to the glycosyl hydrolase 30 family.
 
 
 0.754
CQ394_18400
Unannotated protein; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.743
Your Current Organism:
Clostridium neonatale
NCBI taxonomy Id: 137838
Other names: ATCC BAA-265, C. neonatale, CCUG 46077, strain AIP 250.09, strain LCDC 99A005, strain NML 99-A-005, strain NML 99A005, strain St. Boniface Hospital 30686
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.