Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CQ394_02235 | GCA_001458595_01905 | GCA_001458595_01900 | GCA_001458595_01905 | Unannotated protein. | Unannotated protein. | 0.523 |
CQ394_02235 | GCA_001458595_01906 | GCA_001458595_01900 | GCA_001458595_01906 | Unannotated protein. | Unannotated protein. | 0.440 |
CQ394_02235 | atpA-2 | GCA_001458595_01900 | GCA_001458595_01902 | Unannotated protein. | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. | 0.999 |
CQ394_02235 | atpB-2 | GCA_001458595_01900 | GCA_001458595_01903 | Unannotated protein. | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. | 0.999 |
CQ394_02235 | atpD-2 | GCA_001458595_01900 | GCA_001458595_01904 | Unannotated protein. | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
CQ394_02265 | GCA_001458595_01906 | GCA_001458595_01907 | GCA_001458595_01906 | Unannotated protein; Belongs to the 5'-nucleotidase family. | Unannotated protein. | 0.447 |
GCA_001458595_00012 | GCA_001458595_01906 | GCA_001458595_00012 | GCA_001458595_01906 | Unannotated protein. | Unannotated protein. | 0.793 |
GCA_001458595_00450 | GCA_001458595_01906 | GCA_001458595_00450 | GCA_001458595_01906 | Unannotated protein. | Unannotated protein. | 0.793 |
GCA_001458595_01905 | CQ394_02235 | GCA_001458595_01905 | GCA_001458595_01900 | Unannotated protein. | Unannotated protein. | 0.523 |
GCA_001458595_01905 | GCA_001458595_01906 | GCA_001458595_01905 | GCA_001458595_01906 | Unannotated protein. | Unannotated protein. | 0.921 |
GCA_001458595_01905 | atpA-2 | GCA_001458595_01905 | GCA_001458595_01902 | Unannotated protein. | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. | 0.559 |
GCA_001458595_01905 | atpB-2 | GCA_001458595_01905 | GCA_001458595_01903 | Unannotated protein. | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. | 0.559 |
GCA_001458595_01905 | atpD-2 | GCA_001458595_01905 | GCA_001458595_01904 | Unannotated protein. | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.559 |
GCA_001458595_01906 | CQ394_02235 | GCA_001458595_01906 | GCA_001458595_01900 | Unannotated protein. | Unannotated protein. | 0.440 |
GCA_001458595_01906 | CQ394_02265 | GCA_001458595_01906 | GCA_001458595_01907 | Unannotated protein. | Unannotated protein; Belongs to the 5'-nucleotidase family. | 0.447 |
GCA_001458595_01906 | GCA_001458595_00012 | GCA_001458595_01906 | GCA_001458595_00012 | Unannotated protein. | Unannotated protein. | 0.793 |
GCA_001458595_01906 | GCA_001458595_00450 | GCA_001458595_01906 | GCA_001458595_00450 | Unannotated protein. | Unannotated protein. | 0.793 |
GCA_001458595_01906 | GCA_001458595_01905 | GCA_001458595_01906 | GCA_001458595_01905 | Unannotated protein. | Unannotated protein. | 0.921 |
GCA_001458595_01906 | GCA_001458595_03413 | GCA_001458595_01906 | GCA_001458595_03413 | Unannotated protein. | Unannotated protein. | 0.793 |
GCA_001458595_01906 | GCA_001458595_03587 | GCA_001458595_01906 | GCA_001458595_03587 | Unannotated protein. | Unannotated protein. | 0.793 |
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