STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQ394_03280Unannotated protein; Essential cell division protein. (250 aa)    
Predicted Functional Partners:
CQ394_03250
Unannotated protein.
  
 
 0.978
CQ394_03275
Unannotated protein; Belongs to the SEDS family.
  
 
 0.960
CQ394_09225
Unannotated protein.
  
 
 0.949
murF
Unannotated protein; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
  
 
 0.944
CQ394_03255
Unannotated protein.
 
 
 0.943
CQ394_02170
Unannotated protein.
  
 
 0.940
cphA
Unannotated protein.
  
  
 0.928
CQ394_18135
Unannotated protein.
 
 
 0.910
CQ394_18110
Unannotated protein; Belongs to the SEDS family.
  
 
 0.905
CQ394_20005
Unannotated protein.
   
 
 0.898
Your Current Organism:
Clostridium neonatale
NCBI taxonomy Id: 137838
Other names: ATCC BAA-265, C. neonatale, CCUG 46077, strain AIP 250.09, strain LCDC 99A005, strain NML 99-A-005, strain NML 99A005, strain St. Boniface Hospital 30686
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.