Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CQ394_02705 | cmk | GCA_001458595_02000 | GCA_001458595_02460 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein. | 0.694 |
CQ394_02705 | der | GCA_001458595_02000 | GCA_001458595_03300 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.738 |
CQ394_02705 | scpA | GCA_001458595_02000 | GCA_001458595_02169 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.475 |
CQ394_02705 | scpB | GCA_001458595_02000 | GCA_001458595_02170 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.662 |
CQ394_03640 | cmk | GCA_001458595_02188 | GCA_001458595_02460 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein. | 0.856 |
CQ394_03640 | der | GCA_001458595_02188 | GCA_001458595_03300 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.859 |
CQ394_03640 | scpA | GCA_001458595_02188 | GCA_001458595_02169 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.476 |
CQ394_03640 | scpB | GCA_001458595_02188 | GCA_001458595_02170 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.705 |
CQ394_04695 | CQ394_04715 | GCA_001458595_02405 | GCA_001458595_02409 | Unannotated protein. | Unannotated protein. | 0.995 |
CQ394_04695 | scpB | GCA_001458595_02405 | GCA_001458595_02170 | Unannotated protein. | Unannotated protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.711 |
CQ394_04715 | CQ394_04695 | GCA_001458595_02409 | GCA_001458595_02405 | Unannotated protein. | Unannotated protein. | 0.995 |
CQ394_04715 | scpB | GCA_001458595_02409 | GCA_001458595_02170 | Unannotated protein. | Unannotated protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.711 |
CQ394_16280 | cmk | GCA_001458595_00431 | GCA_001458595_02460 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein. | 0.722 |
CQ394_16280 | der | GCA_001458595_00431 | GCA_001458595_03300 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.815 |
CQ394_16280 | scpA | GCA_001458595_00431 | GCA_001458595_02169 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.454 |
CQ394_16280 | scpB | GCA_001458595_00431 | GCA_001458595_02170 | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | Unannotated protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.648 |
cmk | CQ394_02705 | GCA_001458595_02460 | GCA_001458595_02000 | Unannotated protein. | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | 0.694 |
cmk | CQ394_03640 | GCA_001458595_02460 | GCA_001458595_02188 | Unannotated protein. | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | 0.856 |
cmk | CQ394_16280 | GCA_001458595_02460 | GCA_001458595_00431 | Unannotated protein. | Unannotated protein; Belongs to the pseudouridine synthase RsuA family. | 0.722 |
cmk | der | GCA_001458595_02460 | GCA_001458595_03300 | Unannotated protein. | Unannotated protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.975 |
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