Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CQ394_01450 | sigI | GCA_001458595_01731 | GCA_001458595_02401 | Unannotated protein. | Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily. | 0.833 |
CQ394_04120 | CQ394_11030 | GCA_001458595_02288 | GCA_001458595_03694 | Unannotated protein. | Unannotated protein; Belongs to the flagella basal body rod proteins family. | 0.910 |
CQ394_04120 | CQ394_11225 | GCA_001458595_02288 | GCA_001458595_03734 | Unannotated protein. | Unannotated protein. | 0.824 |
CQ394_04120 | CQ394_11230 | GCA_001458595_02288 | GCA_001458595_03735 | Unannotated protein. | Unannotated protein. | 0.999 |
CQ394_04120 | flhB | GCA_001458595_02288 | GCA_001458595_03676 | Unannotated protein. | Unannotated protein; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. | 0.984 |
CQ394_04120 | sigI | GCA_001458595_02288 | GCA_001458595_02401 | Unannotated protein. | Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily. | 0.783 |
CQ394_04680 | sigI | GCA_001458595_02402 | GCA_001458595_02401 | Unannotated protein. | Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily. | 0.994 |
CQ394_11030 | CQ394_04120 | GCA_001458595_03694 | GCA_001458595_02288 | Unannotated protein; Belongs to the flagella basal body rod proteins family. | Unannotated protein. | 0.910 |
CQ394_11030 | CQ394_11225 | GCA_001458595_03694 | GCA_001458595_03734 | Unannotated protein; Belongs to the flagella basal body rod proteins family. | Unannotated protein. | 0.868 |
CQ394_11030 | CQ394_11230 | GCA_001458595_03694 | GCA_001458595_03735 | Unannotated protein; Belongs to the flagella basal body rod proteins family. | Unannotated protein. | 0.999 |
CQ394_11030 | flhB | GCA_001458595_03694 | GCA_001458595_03676 | Unannotated protein; Belongs to the flagella basal body rod proteins family. | Unannotated protein; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. | 0.999 |
CQ394_11030 | sigI | GCA_001458595_03694 | GCA_001458595_02401 | Unannotated protein; Belongs to the flagella basal body rod proteins family. | Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily. | 0.787 |
CQ394_11225 | CQ394_04120 | GCA_001458595_03734 | GCA_001458595_02288 | Unannotated protein. | Unannotated protein. | 0.824 |
CQ394_11225 | CQ394_11030 | GCA_001458595_03734 | GCA_001458595_03694 | Unannotated protein. | Unannotated protein; Belongs to the flagella basal body rod proteins family. | 0.868 |
CQ394_11225 | CQ394_11230 | GCA_001458595_03734 | GCA_001458595_03735 | Unannotated protein. | Unannotated protein. | 0.952 |
CQ394_11225 | flhB | GCA_001458595_03734 | GCA_001458595_03676 | Unannotated protein. | Unannotated protein; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. | 0.918 |
CQ394_11225 | sigI | GCA_001458595_03734 | GCA_001458595_02401 | Unannotated protein. | Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily. | 0.955 |
CQ394_11230 | CQ394_04120 | GCA_001458595_03735 | GCA_001458595_02288 | Unannotated protein. | Unannotated protein. | 0.999 |
CQ394_11230 | CQ394_11030 | GCA_001458595_03735 | GCA_001458595_03694 | Unannotated protein. | Unannotated protein; Belongs to the flagella basal body rod proteins family. | 0.999 |
CQ394_11230 | CQ394_11225 | GCA_001458595_03735 | GCA_001458595_03734 | Unannotated protein. | Unannotated protein. | 0.952 |
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