Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CQ394_16905 | fbp | GCA_001458595_00561 | GCA_001458595_02079 | Unannotated protein. | Unannotated protein. | 0.870 |
CQ394_16905 | manA | GCA_001458595_00561 | GCA_001458595_01118 | Unannotated protein. | Unannotated protein. | 0.532 |
CQ394_16905 | pfkA | GCA_001458595_00561 | GCA_001458595_03429 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily. | 0.904 |
CQ394_16905 | pfkB | GCA_001458595_00561 | GCA_001458595_02408 | Unannotated protein. | Unannotated protein; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.929 |
CQ394_16905 | pfp | GCA_001458595_00561 | GCA_001458595_01217 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. | 0.907 |
CQ394_16905 | pgi | GCA_001458595_00561 | GCA_001458595_00435 | Unannotated protein. | Unannotated protein; Belongs to the GPI family. | 0.962 |
CQ394_16905 | pyk | GCA_001458595_00561 | GCA_001458595_00883 | Unannotated protein. | Unannotated protein; Belongs to the pyruvate kinase family. | 0.954 |
CQ394_16905 | pyk-2 | GCA_001458595_00561 | GCA_001458595_04209 | Unannotated protein. | Unannotated protein; Belongs to the pyruvate kinase family. | 0.954 |
CQ394_16905 | rpiB | GCA_001458595_00561 | GCA_001458595_00758 | Unannotated protein. | Unannotated protein. | 0.554 |
fba | fbp | GCA_001458595_02543 | GCA_001458595_02079 | Unannotated protein. | Unannotated protein. | 0.872 |
fba | manA | GCA_001458595_02543 | GCA_001458595_01118 | Unannotated protein. | Unannotated protein. | 0.532 |
fba | pfkA | GCA_001458595_02543 | GCA_001458595_03429 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily. | 0.910 |
fba | pfkB | GCA_001458595_02543 | GCA_001458595_02408 | Unannotated protein. | Unannotated protein; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.948 |
fba | pfp | GCA_001458595_02543 | GCA_001458595_01217 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. | 0.907 |
fba | pgi | GCA_001458595_02543 | GCA_001458595_00435 | Unannotated protein. | Unannotated protein; Belongs to the GPI family. | 0.962 |
fba | pyk | GCA_001458595_02543 | GCA_001458595_00883 | Unannotated protein. | Unannotated protein; Belongs to the pyruvate kinase family. | 0.954 |
fba | pyk-2 | GCA_001458595_02543 | GCA_001458595_04209 | Unannotated protein. | Unannotated protein; Belongs to the pyruvate kinase family. | 0.954 |
fba | rpiB | GCA_001458595_02543 | GCA_001458595_00758 | Unannotated protein. | Unannotated protein. | 0.554 |
fbp | CQ394_16905 | GCA_001458595_02079 | GCA_001458595_00561 | Unannotated protein. | Unannotated protein. | 0.870 |
fbp | fba | GCA_001458595_02079 | GCA_001458595_02543 | Unannotated protein. | Unannotated protein. | 0.872 |
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