Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YheH_3ABC transporter, ATP-binding protein; KEGG: bya:BANAU_0899 5.7e-94 yheH; Lipid A export ATP-binding/permease protein msbA K06147; Psort location: CytoplasmicMembrane, score: 10.00. (577 aa)    
Predicted Functional Partners:
MsbA_2
ABC transporter, ATP-binding protein; KEGG: tcx:Tcr_1519 7.8e-42 Lipid A export ATP-binding/permease MsbA; K11085 ATP-binding cassette, subfamily B, bacterial MsbA; Psort location: CytoplasmicMembrane, score: 10.00.
 
    
0.913
LolD_4
Putative bacteriocin export ABC transporter; KEGG: scp:HMPREF0833_10128 8.2e-79 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
     
0.901
KXB64335.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_4126 1.3e-50 xenobiotic-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
 
    
0.861
YheI_2
KEGG: bya:BANAU_0898 1.7e-87 yheI; putative ABC transporter (ATP-binding protein) YheI K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
    
0.839
GlnQ
Putative glutamine ABC transporter, ATP-binding protein GlnQ; KEGG: scp:HMPREF0833_10253 1.2e-84 amino acid ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
    
0.735
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.538
MsbA_1
ABC transporter, ATP-binding protein; KEGG: ssr:SALIVB_0212 1.2e-47 msbA; lipid A export ATP-binding/permease msbA; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
  
0.537
KXB59064.1
KEGG: cle:Clole_3663 1.7e-181 bacteriocin ABC transporter; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.489
YkoD_3
KEGG: ssr:SALIVB_0972 3.7e-90 putative ABC transporter ATP-binding protein SMU_1934c K02006; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
0.453
RnhA
Hypothetical protein; KEGG: cdc:CD196_1304 6.4e-47 ribonuclease; K03469 ribonuclease HI; Psort location: Cytoplasmic, score: 7.50.
       0.421
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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