STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB64331.1ABC transporter, ATP-binding protein; KEGG: ssr:SALIVB_0212 5.3e-68 msbA; lipid A export ATP-binding/permease msbA; Psort location: CytoplasmicMembrane, score: 10.00. (535 aa)    
Predicted Functional Partners:
ecfA
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
    
0.910
potA
Putrescine/spermidine ABC transporter ATPase protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
   
0.894
metN
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     
0.875
LolD_4
Putative bacteriocin export ABC transporter; KEGG: scp:HMPREF0833_10128 8.2e-79 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
    
0.848
KXB62089.1
ABC transporter, ATP-binding protein; KEGG: scp:HMPREF0833_11728 9.7e-76 opuCA; glycine/betaine/L-proline ABC transporter ATP-binding protein K05847; Psort location: CytoplasmicMembrane, score: 8.78.
 
    
0.795
KXB60186.1
Putative mutacin ABC transporter, ATP-binding protein MutF; KEGG: bya:BANAU_3686 2.3e-35 bcrA3; bacitracin transport ATP-binding protein BcrA K09687; Psort location: CytoplasmicMembrane, score: 8.78.
 
  0.695
MetN2_3
KEGG: snc:HMPREF0837_11946 3.8e-42 ABC transporter ATP-binding protein K01990; Psort location: CytoplasmicMembrane, score: 8.78.
  
     0.629
MsbA_1
ABC transporter, ATP-binding protein; KEGG: ssr:SALIVB_0212 1.2e-47 msbA; lipid A export ATP-binding/permease msbA; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
  
0.589
thrS
threonine--tRNA ligase; KEGG: sca:Sca_1289 9.1e-238 thrS; threonyl-tRNA synthetase K01868; Psort location: Cytoplasmic, score: 10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.
 
   0.583
KXB63117.1
KEGG: bao:BAMF_1004 2.2e-62 yhcH; ABC transporter ATP-binding protein K09687; Psort location: CytoplasmicMembrane, score: 8.78.
 
  0.536
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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