Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KXB63363.1 | KXB64334.1 | HMPREF3186_00150 | HMPREF3186_00040 | Cell wall-binding repeat protein; KEGG: smb:smi_1563 7.5e-21 lytC; choline-binding protein LytC, 4-beta-N-acetylmuramidase, Cpb13; Psort location: Extracellular, score: 8.91. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.423 |
| KXB64333.1 | KXB64334.1 | HMPREF3186_00039 | HMPREF3186_00040 | Efflux ABC transporter, permease protein; KEGG: efu:HMPREF0351_10749 3.0e-38 ABC superfamily ATP binding cassette transporter, membrane protein K02004; Psort location: CytoplasmicMembrane, score: 10.00. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.464 |
| KXB64333.1 | LolD_4 | HMPREF3186_00039 | HMPREF3186_00038 | Efflux ABC transporter, permease protein; KEGG: efu:HMPREF0351_10749 3.0e-38 ABC superfamily ATP binding cassette transporter, membrane protein K02004; Psort location: CytoplasmicMembrane, score: 10.00. | Putative bacteriocin export ABC transporter; KEGG: scp:HMPREF0833_10128 8.2e-79 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78. | 0.986 |
| KXB64334.1 | KXB63363.1 | HMPREF3186_00040 | HMPREF3186_00150 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | Cell wall-binding repeat protein; KEGG: smb:smi_1563 7.5e-21 lytC; choline-binding protein LytC, 4-beta-N-acetylmuramidase, Cpb13; Psort location: Extracellular, score: 8.91. | 0.423 |
| KXB64334.1 | KXB64333.1 | HMPREF3186_00040 | HMPREF3186_00039 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | Efflux ABC transporter, permease protein; KEGG: efu:HMPREF0351_10749 3.0e-38 ABC superfamily ATP binding cassette transporter, membrane protein K02004; Psort location: CytoplasmicMembrane, score: 10.00. | 0.464 |
| KXB64334.1 | LolD_4 | HMPREF3186_00040 | HMPREF3186_00038 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | Putative bacteriocin export ABC transporter; KEGG: scp:HMPREF0833_10128 8.2e-79 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78. | 0.466 |
| KXB64334.1 | TopB | HMPREF3186_00040 | HMPREF3186_01633 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | KEGG: cbn:CbC4_2099 9.8e-186 DNA topoisomerase III; K03169 DNA topoisomerase III; Psort location: Cytoplasmic, score: 9.97. | 0.508 |
| KXB64334.1 | topA | HMPREF3186_00040 | HMPREF3186_00417 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.508 |
| LolD_4 | KXB64333.1 | HMPREF3186_00038 | HMPREF3186_00039 | Putative bacteriocin export ABC transporter; KEGG: scp:HMPREF0833_10128 8.2e-79 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78. | Efflux ABC transporter, permease protein; KEGG: efu:HMPREF0351_10749 3.0e-38 ABC superfamily ATP binding cassette transporter, membrane protein K02004; Psort location: CytoplasmicMembrane, score: 10.00. | 0.986 |
| LolD_4 | KXB64334.1 | HMPREF3186_00038 | HMPREF3186_00040 | Putative bacteriocin export ABC transporter; KEGG: scp:HMPREF0833_10128 8.2e-79 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.466 |
| TopB | KXB64334.1 | HMPREF3186_01633 | HMPREF3186_00040 | KEGG: cbn:CbC4_2099 9.8e-186 DNA topoisomerase III; K03169 DNA topoisomerase III; Psort location: Cytoplasmic, score: 9.97. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.508 |
| TopB | topA | HMPREF3186_01633 | HMPREF3186_00417 | KEGG: cbn:CbC4_2099 9.8e-186 DNA topoisomerase III; K03169 DNA topoisomerase III; Psort location: Cytoplasmic, score: 9.97. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.630 |
| topA | KXB64334.1 | HMPREF3186_00417 | HMPREF3186_00040 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.508 |
| topA | TopB | HMPREF3186_00417 | HMPREF3186_01633 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | KEGG: cbn:CbC4_2099 9.8e-186 DNA topoisomerase III; K03169 DNA topoisomerase III; Psort location: Cytoplasmic, score: 9.97. | 0.630 |