STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SglTTransporter, SSS family; KEGG: hiq:CGSHiGG_00405 1.2e-13 cytidine deaminase K11928; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (517 aa)    
Predicted Functional Partners:
NanM
Cyclically-permuted mutarotase family protein; KEGG: bhl:Bache_2780 8.6e-30 mutarotase.
   
 0.929
nanA
N-acetylneuraminate lyase; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate.
 
  
 0.894
AldA
Putative succinate-semialdehyde dehydrogenase; KEGG: nmq:NMBM04240196_1906 4.9e-168 aldA; aldehyde dehydrogenase A K07248; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.557
KXB64350.1
KEGG: lsa:LSA1643 1.3e-50 ROK family sugar kinase; K00924; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.511
KXB64354.1
Acetyl xylan esterase; KEGG: ssf:SSUA7_0863 7.9e-13 putative acetyl xylan esterase; K01060 cephalosporin-C deacetylase; Psort location: Cytoplasmic, score: 7.50.
       0.440
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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