STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hemHFerrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (405 aa)    
Predicted Functional Partners:
HemY
Protoporphyrinogen oxidase; KEGG: btc:CT43_CH1023 1.0e-32 hemY1; protoporphyrinogen oxidase; K00231 oxygen-dependent protoporphyrinogen oxidase; Psort location: Cytoplasmic, score: 9.89.
 
 
 0.992
KXB59684.1
Signal peptide protein, YSIRK family; KEGG: gtn:GTNG_2102 1.6e-09 penicillin-binding proteins 1A and 1B; K05366 penicillin-binding protein 1A.
 
   
 0.609
TatAy
Twin arginine-targeting protein translocase, TatA/E family; Psort location: CytoplasmicMembrane, score: 9.99.
 
    0.600
KXB57125.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.490
KXB63615.1
HesB-like protein; KEGG: rno:290985 5.0e-08 Isca1, Hbld2, hIscA; iron-sulfur cluster assembly 1 homolog (S. cerevisiae) K13628; Psort location: Cytoplasmic, score: 7.50; Belongs to the HesB/IscA family.
  
  
 0.479
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
   
  
 0.460
tatC
Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
 
     0.438
KXB61961.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0358 family.
  
     0.434
mntH
Metal ion transporter, metal ion transporter family; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
  
  
 0.414
KXB64051.1
Hypothetical protein; KEGG: cbh:CLC_2488 0.00057 thiosulfate sulfurtransferase; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase.
       0.411
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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