STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB63626.1SNARE-like domain protein; KEGG: teq:TEQUI_1292 1.3e-34 Nicotinamidase; Psort location: CytoplasmicMembrane, score: 10.00. (436 aa)    
Predicted Functional Partners:
KXB63616.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: suh:SAMSHR1132_07930 3.4e-96 NADH dehydrogenase-like protein K03885; Psort location: CytoplasmicMembrane, score: 8.78.
  
  
 0.653
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
  
 0.613
gpsA
KEGG: mcl:MCCL_1125 2.3e-99 glyC; NAD(P)+-dependent glycerol-3-phosphate dehydrogenase; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.593
cinA
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 4.5e-15 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: CytoplasmicMembrane, score: 8.16; Belongs to the CinA family.
     
 0.573
KXB63628.1
Hypothetical protein; KEGG: spv:SPH_1901 3.8e-05 peptidase, M50 family protein K01417; Psort location: CytoplasmicMembrane, score: 10.00.
       0.552
FruA
KEGG: aur:HMPREF9243_1309 1.3e-181 fruA_2; PTS system fructose-specific transporter subunit IIABC; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.552
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.552
KXB63627.1
Hypothetical protein; KEGG: snc:HMPREF0837_11607 4.7e-99 carB2; carbamoylphosphate synthase large subunit; Psort location: Cytoplasmic, score: 7.50.
       0.543
RsmB
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
     
 0.541
sigA
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
  
  
 0.539
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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