STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB63641.1KEGG: sha:SH1326 5.5e-57 comEB; late competence operon required for DNA binding and uptake; K01493 dCMP deaminase; Psort location: Cytoplasmic, score: 7.50. (153 aa)    
Predicted Functional Partners:
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
  
 
 0.938
tmk
dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
    
 0.927
tdk
Thymidine kinase; KEGG: sau:SA1921 2.2e-62 tdk; thymidine kinase K00857; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.927
KXB63640.1
comEA protein; KEGG: has:Halsa_0780 4.0e-11 glycogen/starch synthase K00703; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.840
KXB63642.1
Putative DNA internalization competence protein ComEC/Rec2-like protein; KEGG: apb:SAR116_0501 1.7e-15 DNA uptake protein ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.819
KXB63643.1
KEGG: ser:SERP1154 7.3e-55 holA; DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta; Psort location: Cytoplasmic, score: 7.50.
  
    0.809
gatB
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.
      0.732
KXB63644.1
Hypothetical protein; KEGG: aba:Acid345_1304 0.0051 proton-translocating NADH-quinone oxidoreductase, chain M; K00342 NADH-quinone oxidoreductase subunit M; Psort location: CytoplasmicMembrane, score: 10.00.
       0.531
PepQ
Creatinase; KEGG: cby:CLM_2472 1.8e-186 metallopeptidase, family M24; K01262 Xaa-Pro aminopeptidase; Psort location: Cytoplasmic, score: 9.97.
  
    0.521
KXB63639.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.516
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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