STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB63576.1Hypothetical protein; KEGG: zin:ZICARI_096 0.0020 nuoN; putative NADH:ubiquinone oxidoreductase I, membrane subunit N; K00343 NADH-quinone oxidoreductase subunit N; Psort location: CytoplasmicMembrane, score: 10.00. (532 aa)    
Predicted Functional Partners:
KXB63577.1
Acyltransferase; KEGG: bpu:BPUM_0258 2.8e-21 acyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.776
KXB63575.1
Hypothetical protein; KEGG: zin:ZICARI_230 0.00024 cyoE; putative protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase; Psort location: CytoplasmicMembrane, score: 9.99.
       0.514
WcaJ_2
Bacterial sugar transferase; KEGG: spd:SPD_1620 1.2e-63 glycosyl transferase family protein K00754; Psort location: CytoplasmicMembrane, score: 8.78.
       0.501
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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