STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fniIsopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). (316 aa)    
Predicted Functional Partners:
KXB63132.1
Diphosphomevalonate decarboxylase; KEGG: sub:SUB0766 1.4e-69 mvaD; mevalonate diphosphate decarboxylase K01597.
 
  
 0.994
KXB63131.1
KEGG: smu:SMU_938 4.4e-32 phosphomevalonate kinase; K00938 phosphomevalonate kinase.
  
 0.986
KXB63133.1
Mevalonate kinase; KEGG: smf:Smon_1124 1.0e-48 mevalonate kinase; K00869 mevalonate kinase.
 
  
 0.950
KXB59358.1
Putative geranyltranstransferase; KEGG: fnu:FN1327 4.7e-51 dimethylallyltransferase K13789; Psort location: Cytoplasmic, score: 9.97; Belongs to the FPP/GGPP synthase family.
  
 
 0.922
PksG
KEGG: lba:Lebu_0852 7.1e-128 hydroxymethylglutaryl-CoA synthase; K01641 hydroxymethylglutaryl-CoA synthase.
 
  
 0.824
MvaA
KEGG: lba:Lebu_0850 1.9e-127 hydroxymethylglutaryl-CoA reductase, degradative; K00054 hydroxymethylglutaryl-CoA reductase; Belongs to the HMG-CoA reductase family.
   
 0.713
GlcA
Transporter, lactate permease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
  
  
 0.609
LutP
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
  
  
 0.609
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
  
 0.593
KXB63617.1
Aminotransferase, class V; KEGG: bcz:BCZK2217 3.6e-92 serine-pyruvate aminotransferase; Psort location: Cytoplasmic, score: 9.97.
  
 0.549
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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