STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AfrOxidoreductase, NAD-binding domain protein; KEGG: sjj:SPJ_1241 7.6e-163 putative oxidoreductase YjhC; Psort location: Cytoplasmic, score: 7.50. (368 aa)    
Predicted Functional Partners:
YdjH
Kinase, PfkB family; KEGG: cdf:CD1806 9.0e-57 scrK; fructokinase; K00847 fructokinase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.697
YhhX
Oxidoreductase, NAD-binding domain protein; KEGG: stj:SALIVA_0612 4.8e-74 yulF; putative oxidoreductase yulF.
  
     0.658
AldA
Putative succinate-semialdehyde dehydrogenase; KEGG: nmq:NMBM04240196_1906 4.9e-168 aldA; aldehyde dehydrogenase A K07248; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.593
ArnB
DegT/DnrJ/EryC1/StrS aminotransferase family protein; KEGG: bce:BC5273 6.6e-132 UDP-bacillosamine synthetase; Psort location: Cytoplasmic, score: 9.97; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.581
lysS
lysine--tRNA ligase; KEGG: bpu:BPUM_0066 1.8e-202 lysS; lysyl-tRNA synthetase K04567; Psort location: Cytoplasmic, score: 10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.564
MnaA
KEGG: scp:HMPREF0833_11377 2.0e-148 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.544
rpmF
Ribosomal protein L32; KEGG: apb:SAR116_0011 3.1e-08 50S ribosomal protein L32 K02911; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bL32 family.
  
    0.453
LacR_1
Transcriptional regulator, DeoR family; KEGG: lcb:LCABL_29260 9.0e-25 nadD; Nicotinic acid mononucleotide adenyltransferase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.414
cas1
CRISPR-associated endonuclease Cas1, NMENI subtype; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
  
 
 0.401
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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